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8Q10

Endothiapepsin in complex with ligand (3R,5R)-3-(2-(hydroxymethyl)thiazol-4-yl)-5-(3-(4-(trifluoromethyl)phenyl)-1,2,4-oxadiazol-5-yl)pyrrolidin-3-ol (CBWS-SE-125)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-07-07
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.99187
Spacegroup nameP 1 21 1
Unit cell lengths44.857, 72.472, 52.427
Unit cell angles90.00, 109.17, 90.00
Refinement procedure
Resolution27.970 - 1.270
R-factor0.1451
Rwork0.144
R-free0.16480
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.794
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.350
High resolution limit [Å]1.2701.270
Number of reflections8311713272
<I/σ(I)>9.792
Completeness [%]99.398.2
Redundancy3.77
CC(1/2)0.9970.813
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.6292Protein at 5 mg/mL in 100 mM ammoniumacetate pH 4.6, reservoir: 100 mM ammoniumacetate, 100 mM sodium acetate pH 4.6, 24 % PEG4000, 292 K, 2+2 yL drops over 1 mL reservoir, streak seeding

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PDB entries from 2024-08-07

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