8Q0E
Crystal Structure of the N-terminal Domain of Variant Surface Glycoprotein 545 (VSG545) of Trypanosome brucei brucei Lister 427
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-06-25 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.414, 52.284, 305.802 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.520 - 3.150 |
R-factor | 0.2385 |
Rwork | 0.236 |
R-free | 0.28750 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.533 |
Data reduction software | DIALS |
Data scaling software | pointless |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.520 | 3.260 |
High resolution limit [Å] | 3.150 | 3.150 |
Rmerge | 0.245 | |
Number of reflections | 13575 | 619 |
<I/σ(I)> | 5.63 | 1.18 |
Completeness [%] | 75.6 | 45.3 |
Redundancy | 4.8 | |
CC(1/2) | 0.993 | 0.785 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 295 | 100 mM MES/NaOH 22 % PEG 8000 and 300 mM Li2SO4 |