8PX4
Structure of the PAS domain code by the LIC_11128 gene from Leptospira interrogans serovar Copenhageni Fiocruz, solved at wavelength 3.09 A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I23 |
Synchrotron site | Diamond |
Beamline | I23 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2016-07-13 |
Detector | DECTRIS PILATUS 12M |
Wavelength(s) | 3.09 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 54.910, 144.560, 48.650 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 72.280 - 2.500 |
R-factor | 0.24325 |
Rwork | 0.242 |
R-free | 0.27653 |
Structure solution method | SAD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.656 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | HKL2Map |
Refinement software | REFMAC (5.8.0415) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 72.280 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.083 | 1.433 |
Rmeas | 0.084 | |
Rpim | 0.012 | |
Number of reflections | 12470 | 1065 |
<I/σ(I)> | 41.69 | 2.39 |
Completeness [%] | 81.0 | 78.66 |
Redundancy | 49.2 | |
CC(1/2) | 0.998 | 0.636 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M BIS-Tris pH 5,5, 17% w/v PEG 10,000, and 0.1 M Ammonium acetate |