8PRL
The structure of v22Bagel8
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-08-06 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.000010 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 56.447, 56.447, 113.052 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.260 - 2.650 |
R-factor | 0.2879 |
Rwork | 0.283 |
R-free | 0.37020 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.007 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.260 | 2.780 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.208 | 0.814 |
Rmeas | 0.213 | 0.837 |
Rpim | 0.044 | 0.188 |
Total number of observations | 131850 | 13067 |
Number of reflections | 5777 | 733 |
<I/σ(I)> | 10.4 | 2.9 |
Completeness [%] | 99.8 | |
Redundancy | 22.8 | 17.8 |
CC(1/2) | 0.995 | 0.922 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5 | 293.15 | 0.1 M Citric acid pH 4.0, 20% (w/v) PEG 6000 (final pH 5.0) |