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8PPM

IL-12Rb1 neutralizing Fab4, crystal kappa variant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2023-04-24
DetectorDECTRIS EIGER2 X CdTe 16M
Wavelength(s)0.9763
Spacegroup nameP 32 2 1
Unit cell lengths72.069, 72.069, 163.833
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution62.410 - 2.030
R-factor0.1946
Rwork0.193
R-free0.22040
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.485
Data reduction softwareXDS (20220820)
Data scaling softwareXDS (20220820)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]163.830163.8302.150
High resolution limit [Å]2.0306.0602.030
Rmeas0.1100.0451.104
Number of reflections3173513634250
<I/σ(I)>18.3859.452.05
Completeness [%]97.099.981.5
Redundancy18.7117.9711.25
CC(1/2)0.9990.9990.688
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP287Fab4 dissociated from target in crystallization drop.

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PDB entries from 2024-11-13

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