8PP5
Unitary crystal structure of positively supercharged ferritin variant Ftn(pos)-m1 (Mg Formate condition)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-09-13 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97625 |
Spacegroup name | I 4 |
Unit cell lengths | 126.898, 126.898, 187.468 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 105.086 - 2.000 |
Rwork | 0.160 |
R-free | 0.19250 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.507 |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0411) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 105.090 | 105.090 | 1.780 |
High resolution limit [Å] | 1.750 | 9.610 | 1.750 |
Rmerge | 0.174 | 0.058 | 3.671 |
Rmeas | 0.193 | 0.064 | 4.335 |
Rpim | 0.082 | 0.027 | 2.240 |
Number of reflections | 145913 | 932 | 6557 |
<I/σ(I)> | 8.3 | ||
Completeness [%] | 98.9 | ||
Redundancy | 10.5 | 11.1 | 6.4 |
CC(1/2) | 0.997 | 0.997 | 0.184 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293.15 | reservoir: 0.19M Magnesium Formate Ftn(pos)-m1: 4 mg/mL in 50mM Tris pH 7.5 0.9 M NaCl 2microliter reservoir + 1microliter Ftn(pos)-m1 +1 microliterL 50mM Tris pH 7.5 0.3 M NaCl |