8PO5
Lactobacillus plantarum LpdD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2018-01-21 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.987 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 53.500, 92.980, 126.820 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 75.033 - 2.100 |
R-factor | 0.197 |
Rwork | 0.195 |
R-free | 0.25180 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.866 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 75.033 | 2.175 |
High resolution limit [Å] | 2.100 | 2.100 |
Number of reflections | 18833 | 1841 |
<I/σ(I)> | 9.83 | |
Completeness [%] | 99.7 | |
Redundancy | 2 | |
CC(1/2) | 1.000 | 0.900 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1M Tris-Cl pH8.5, 0.2M Magnesium chloride, 30% PEG4K |