8PIR
Crystal structure of Ser33 in complex with 3-PGA (3-phosphoglycerate)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 |
Unit cell lengths | 60.599, 95.726, 109.252 |
Unit cell angles | 69.92, 89.53, 86.06 |
Refinement procedure
Resolution | 60.450 - 2.700 |
R-factor | 0.217 |
Rwork | 0.215 |
R-free | 0.24490 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.662 |
Data reduction software | autoPROC |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.450 | 2.797 |
High resolution limit [Å] | 2.700 | 2.700 |
Number of reflections | 61940 | 6232 |
<I/σ(I)> | 13.01 | 2.61 |
Completeness [%] | 97.7 | |
Redundancy | 3.5 | |
CC(1/2) | 0.998 | 0.905 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2M 1,6-Hexanediol; 0.2M 1-Butanol; 0.2M 1,2-Propanediol; 0.2M 2-Propanol; 0.2M 1,4-Butanediol; 0.2M 1,3-Propanediol 0.1M Sodium HEPES; MOPS (acid) pH=7.5 20% v/v Glycerol; 10% w/v PEG 4000 7.4 mg/ml of protein in 25 mM Tris pH=7.5 and 150 mM NaCl |