8PFQ

RNA structure with 1-methylpseudouridine, P1 space group

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	SLS BEAMLINE X06SA
Synchrotron site	SLS
Beamline	X06SA
Temperature [K]	100
Detector technology	PIXEL
Collection date	2022-02-09
Detector	DECTRIS PILATUS 2M-F
Wavelength(s)	1.000
Spacegroup name	P 1
Unit cell lengths	26.763, 27.037, 29.141
Unit cell angles	62.59, 63.80, 88.70

Refinement procedure

Resolution	23.380 - 1.010
R-factor	0.1551
Rwork	0.154
R-free	0.17530
Structure solution method	AB INITIO PHASING
RMSD bond length	0.004
RMSD bond angle	0.953
Data reduction software	XDS
Data scaling software	XDS
Phasing software	SHELXD
Refinement software	PHENIX (1.20.1_4487)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	23.380	1.046
High resolution limit [Å]	1.010	1.010
Rmerge	0.052	0.809
Rmeas	0.052	1.095
Rpim	0.028	0.733
Number of reflections	27271	1270
<I/σ(I)>	8.86	0.61
Completeness [%]	82.0	25.97
Redundancy	3.3
CC(1/2)	0.998	0.465

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	7	298	10 % v/v MPD, 40 mM sodium cacodylate, 12 mM spermine and 80 mM potassium chloride