8PFC
Crystal structure of binary complex between Aster yellows witches'-broom phytoplasma effector SAP05 and the zinc finger domain of SPL5 from Arabidopsis thaliana
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-04-25 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 78.686, 165.019, 80.862 |
Unit cell angles | 90.00, 109.65, 90.00 |
Refinement procedure
Resolution | 74.210 - 2.200 |
R-factor | 0.22438 |
Rwork | 0.223 |
R-free | 0.25069 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.509 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | CRANK2 |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 82.510 | 2.240 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.129 | 2.104 |
Rmeas | 0.134 | 2.182 |
Rpim | 0.035 | 0.577 |
Total number of observations | 1386043 | |
Number of reflections | 98262 | 4890 |
<I/σ(I)> | 10.4 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 14.1 | 14.3 |
CC(1/2) | 0.999 | 0.791 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | NULL |