8P8Q
Recombinant Ym1 crystal structure
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SOLEIL BEAMLINE PROXIMA 1 |
| Synchrotron site | SOLEIL |
| Beamline | PROXIMA 1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-07-05 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97857 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 50.331, 60.009, 60.115 |
| Unit cell angles | 90.00, 94.66, 90.00 |
Refinement procedure
| Resolution | 42.400 - 1.792 |
| R-factor | 0.1742 |
| Rwork | 0.173 |
| R-free | 0.19860 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.910 |
| Data reduction software | XDS (VERSION Jan 26, 2018 BUILT=20180808) |
| Data scaling software | Aimless (version 0.7.4) |
| Phasing software | PHASER |
| Refinement software | BUSTER (2.10.3 (6-FEB-2020)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 59.920 | 1.900 |
| High resolution limit [Å] | 1.790 | 1.790 |
| Rmeas | 0.247 | 1.121 |
| Number of reflections | 33407 | 5172 |
| <I/σ(I)> | 5.28 | 1.54 |
| Completeness [%] | 99.2 | 96 |
| Redundancy | 4.06 | |
| CC(1/2) | 0.979 | 0.566 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | Condition A7 of the Hampton Research Crystal Screen HT (0.1 M sodium cacodylate pH 6.5, 1.4 M sodium acetate) Cryo-protection: mother liquor supplemented with 30% (v/v) glycerol |






