Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8P86

Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 5 mM MG-132, from an "old" crystal.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsELETTRA BEAMLINE 11.2C
Synchrotron siteELETTRA
Beamline11.2C
Temperature [K]100
Detector technologyPIXEL
Collection date2021-01-26
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.000
Spacegroup nameP 21 21 21
Unit cell lengths68.366, 99.351, 102.801
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.390 - 1.850
R-factor0.1743
Rwork0.173
R-free0.19690
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.143
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]102.8001.890
High resolution limit [Å]1.8501.850
Rmerge0.080
Number of reflections604273669
<I/σ(I)>12.6
Completeness [%]99.9
Redundancy6.3
CC(1/2)0.9980.594
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.06 M Magnesium chloride hexahydrate, 0.06 M Calcium chloride dihydrate, 0.1 M Hepes/MOPS pH 7.5, 20% v/v PEG 500 MME, 10% w/v PEG 20000

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon