8OZ8
Crystal Structure of an Hydroxynitrile lyase variant (H96A) from Granulicella tundricola
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-12-15 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 152.049, 152.049, 109.920 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 65.840 - 1.850 |
R-factor | 0.1653 |
Rwork | 0.164 |
R-free | 0.19510 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.755 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 131.680 | 131.680 | 1.890 |
High resolution limit [Å] | 1.850 | 9.060 | 1.850 |
Rmerge | 0.246 | 0.065 | 2.258 |
Rmeas | 0.270 | 0.071 | 2.472 |
Rpim | 0.111 | 0.028 | 1.001 |
Number of reflections | 64090 | 656 | 3897 |
<I/σ(I)> | 8.7 | ||
Completeness [%] | 100.0 | 99.8 | |
Redundancy | 11.1 | 9.6 | 11.5 |
CC(1/2) | 0.995 | 0.997 | 0.563 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | KBr, PEG 2000 MME, natrium citrate |