Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8OY5

Time-resolved SFX structure of the class II photolyase complexed with a thymine dimer (1 nanosecond pump-probe delay)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeFREE ELECTRON LASER
Source detailsSwissFEL ARAMIS BEAMLINE ESA
Synchrotron siteSwissFEL ARAMIS
BeamlineESA
Temperature [K]293
Detector technologyPIXEL
Collection date2022-07-02
DetectorPSI JUNGFRAU 16M
Wavelength(s)1.035
Spacegroup nameP 21 21 21
Unit cell lengths70.200, 117.760, 170.470
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution31.290 - 2.270
R-factor0.2947
Rwork0.291
R-free0.35630
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.198
Data reduction softwareCrystFEL
Data scaling softwareCrystFEL
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]31.2906.1462.309
High resolution limit [Å]2.2704.8852.270
Total number of observations110505568
Number of reflections6614434053250
<I/σ(I)>13.37470532.690.7
Completeness [%]100.0100100
Redundancy1670.6816643420.3231.7
CC(1/2)0.9920.9940.543
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE293100 mM Amm sulfate, 100 mM Acetate pH 4.6, 4% PEG 4000, 10 mM Tris pH 7.5, 75 mM NaCl

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon