8OX3
Structure of the murine LYVE-1 (lymphatic vessel endothelial receptor-1) hyaluronan binding domain bound with octasaccharide hyaluronan.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I24 |
| Synchrotron site | Diamond |
| Beamline | I24 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-03-10 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9686 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 86.107, 56.963, 30.908 |
| Unit cell angles | 90.00, 106.27, 90.00 |
Refinement procedure
| Resolution | 46.900 - 1.050 |
| R-factor | 0.1512 |
| Rwork | 0.151 |
| R-free | 0.16290 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.189 |
| Data reduction software | xia2 |
| Data scaling software | xia2 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.21rc1_4899) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.950 | 1.070 |
| High resolution limit [Å] | 1.050 | 1.050 |
| Rmeas | 0.101 | 1.075 |
| Number of reflections | 46097 | 193 |
| <I/σ(I)> | 11.1 | |
| Completeness [%] | 83.0 | |
| Redundancy | 6.4 | |
| CC(1/2) | 1.000 | 0.400 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 20% PEG5000, 0.1M bis-Tris pH6.5, 18 mg/ml |






