8OW7
Crystal structure of Tannerella forsythia sugar kinase K1058 in complex with N-acetylmuramic acid (MurNAc)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-02-05 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 143.750, 143.750, 210.950 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.850 - 3.060 |
Rwork | 0.219 |
R-free | 0.24540 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.609 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0352) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.585 | 3.270 | 3.230 |
High resolution limit [Å] | 3.060 | 3.080 | 3.060 |
Number of reflections | 48712 | 7500 | 7754 |
<I/σ(I)> | 7.97 | ||
Completeness [%] | 100.0 | ||
Redundancy | 20.38 | ||
CC(1/2) | 0.990 | 0.976 | 0.363 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 1.5 M ammonium sulfate, 0.1 M Tris pH 8.5, 12% (v/v) glycerol |
2 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 1.5 M ammonium sulfate, 0.1 M Tris pH 8.5, 12% (v/v) glycerol |