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8OS2

Structure of the human LYVE-1 (lymphatic vessel endothelial receptor-1) hyaluronan binding domain in an unliganded state

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2017-01-23
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9686
Spacegroup nameP 41 21 2
Unit cell lengths70.810, 70.810, 75.770
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.770 - 1.640
R-factor0.1845
Rwork0.183
R-free0.22280
Structure solution methodSAD
RMSD bond length0.006
RMSD bond angle0.969
Data scaling softwarexia2
Phasing softwarePHENIX (1.18.2_3874)
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.7701.670
High resolution limit [Å]1.6401.640
Rmeas0.0591.951
Number of reflections3035771181
<I/σ(I)>211.2
Completeness [%]100.0
Redundancy12.5
CC(1/2)1.0000.500
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2932.5M NaCl, 0.1M Sodium/Potassium Phosphate pH 5.5

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