8OIA
Trichomonas vaginalis riboside hydrolase in complex with D-ribose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-10 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.873 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 116.995, 135.622, 94.075 |
Unit cell angles | 90.00, 104.69, 90.00 |
Refinement procedure
Resolution | 43.981 - 2.300 |
Rwork | 0.234 |
R-free | 0.26990 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.379 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0405) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.981 | 2.250 |
High resolution limit [Å] | 2.200 | 2.200 |
Rpim | 0.136 | 0.425 |
Number of reflections | 71792 | 4593 |
<I/σ(I)> | 5.2 | 1.2 |
Completeness [%] | 99.9 | 100 |
Redundancy | 5.9 | 5.8 |
CC(1/2) | 0.981 | 0.425 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.85 | 291.15 | 200 mM ammonium citrate dibasic pH 4.85, 15% PEG 3300 |