8OFS
Human adenovirus type 30 fiber-knob protein complexed with sialic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 62.130, 62.490, 71.800 |
Unit cell angles | 90.00, 93.85, 90.00 |
Refinement procedure
Resolution | 48.560 - 2.560 |
R-factor | 0.2319 |
Rwork | 0.229 |
R-free | 0.29189 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.222 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 62.490 | 2.630 |
High resolution limit [Å] | 2.560 | 2.560 |
Rmerge | 0.057 | 0.972 |
Rmeas | 0.066 | 1.131 |
Rpim | 0.034 | 0.570 |
Total number of observations | 5020 | |
Number of reflections | 17735 | 1327 |
<I/σ(I)> | 10.5 | 1.1 |
Completeness [%] | 99.0 | |
Redundancy | 3.7 | 3.8 |
CC(1/2) | 0.998 | 0.824 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 0.1M MMT [Malic acid, MES, Tris], 25% w/v PEG 1500 |