8OFH
Streptococcus pneumoniae CdaA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-12-14 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97626 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 62.730, 102.400, 89.790 |
Unit cell angles | 90.00, 98.33, 90.00 |
Refinement procedure
Resolution | 48.280 - 1.640 |
R-factor | 0.193 |
Rwork | 0.192 |
R-free | 0.22320 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 0.902 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.700 |
High resolution limit [Å] | 1.640 | 17.000 | 1.640 |
Rmerge | 0.056 | 0.024 | 1.850 |
Rmeas | 0.060 | 0.026 | 2.074 |
Number of reflections | 130851 | 124 | 9553 |
<I/σ(I)> | 15.74 | ||
Completeness [%] | 95.4 | ||
Redundancy | 6.5 | ||
CC(1/2) | 1.000 | 0.999 | 0.396 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 15% (v/v) PEG3350 0.2 M KSCN, 0.1M Bis-Tris propane pH 7.5 |