8OE8
Crystal structure of the Z-DNA duplex d(CGCGCG) containing ordered copper(II) and soaked in hydrogen peroxide for an hour
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-25 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 1 |
Unit cell lengths | 18.346, 30.665, 42.859 |
Unit cell angles | 89.98, 90.06, 89.94 |
Refinement procedure
Resolution | 21.430 - 1.300 |
R-factor | 0.171 |
Rwork | 0.169 |
R-free | 0.20890 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.949 |
Data reduction software | xia2 |
Data scaling software | DIALS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.860 | 1.320 |
High resolution limit [Å] | 1.300 | 1.300 |
Number of reflections | 21952 | 1072 |
<I/σ(I)> | 19.9 | |
Completeness [%] | 95.4 | |
Redundancy | 3.5 | |
CC(1/2) | 0.998 | 0.789 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 291 | oligo, 2-methyl-2,4-pentanediol (MPD), sodium cacodylate, KCl, NaCl and spermine tetrachloride |