8OE3
Crystal structure of the non-canonical quadruplex d(GCATGCT) before soaking
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-22 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.8266 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 22.157, 59.156, 45.666 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.830 - 1.080 |
R-factor | 0.1649 |
Rwork | 0.164 |
R-free | 0.18500 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.707 |
Data reduction software | xia2 |
Data scaling software | DIALS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.830 | 1.100 |
High resolution limit [Å] | 1.080 | 1.080 |
Number of reflections | 13221 | 608 |
<I/σ(I)> | 14 | |
Completeness [%] | 99.6 | |
Redundancy | 6 | |
CC(1/2) | 0.998 | 0.893 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.7 | 291 | 2 ul 40 mM sodium cacodylate, 1 ul 80 mM hexammine (III) cobalt, 1 ul 10% MPD, 2 ul 800 mM potassium chloride, ul 30 mM sodium chloride, 2 ul 1 mM DNA |