8KEL
Structure of DexA reveal the novel Mechanism of DNA catalysis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-07-30 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 84.548, 76.285, 108.009 |
Unit cell angles | 90.00, 93.36, 90.00 |
Refinement procedure
Resolution | 35.940 - 2.880 |
R-factor | 0.225 |
Rwork | 0.223 |
R-free | 0.27620 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.082 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.940 | 2.980 |
High resolution limit [Å] | 2.880 | 2.880 |
Number of reflections | 30240 | 3066 |
<I/σ(I)> | 8.25 | |
Completeness [%] | 96.0 | |
Redundancy | 4 | |
CC(1/2) | 0.990 | 0.704 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 289 | 0.02M Calcium chloride dihydrate, 0.1M Sodium acetate trihydrate pH 4.6, 30% v/v (+/-)-2-Methyl-2,4-pentanediol |