8KE3
PylRS C-terminus domain mutant bound with D-3-trifluoromethylphenylalanine and AMPNP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL15A1 |
Synchrotron site | NSRRC |
Beamline | BL15A1 |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2017-03-27 |
Detector | RAYONIX MX300HE |
Wavelength(s) | 1 |
Spacegroup name | P 64 |
Unit cell lengths | 104.670, 104.670, 71.813 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 34.261 - 1.900 |
R-factor | 0.185072516224 |
Rwork | 0.184 |
R-free | 0.20729 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2zce |
RMSD bond length | 0.008 |
RMSD bond angle | 1.028 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX (1.11.1_2575) |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.000 | 35.000 | 1.970 |
High resolution limit [Å] | 1.900 | 4.090 | 1.900 |
Rmeas | 0.092 | 0.038 | 0.970 |
Rpim | 0.034 | 0.014 | 0.371 |
Number of reflections | 34993 | 3518 | 3481 |
<I/σ(I)> | 21.4 | ||
Completeness [%] | 98.9 | ||
Redundancy | 6.9 | ||
CC(1/2) | 0.998 | 0.745 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 100 mM HEPES buffer at pH 7.5, 10% PEG 8000, 10% Ethylene Glycerol |