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8KA3

Arabidopsis AP endonuclease ARP complex with 22bp THF-containing DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL18U1
Synchrotron siteSSRF
BeamlineBL18U1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-09-26
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97915
Spacegroup nameC 1 2 1
Unit cell lengths136.731, 52.295, 71.095
Unit cell angles90.00, 117.03, 90.00
Refinement procedure
Resolution29.700 - 3.000
R-factor0.2447
Rwork0.242
R-free0.30200
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.533
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0003.160
High resolution limit [Å]3.0003.000
Rmerge0.1371.182
Rmeas0.1491.283
Rpim0.0580.494
Number of reflections87131348
<I/σ(I)>10.31.7
Completeness [%]94.8
Redundancy6.5
CC(1/2)0.9980.678
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29325% (w/v) PEG 1500, 0.1M PCB/Sodium hydroxide pH 7.0

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PDB entries from 2026-01-28

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