8K6C
Crystal structure of SARS-CoV-2 3CLpro M49K/S301P mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-X |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-19 |
Detector | RIGAKU HyPix-6000HE |
Wavelength(s) | 1.541 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.859, 107.074, 54.261 |
Unit cell angles | 90.00, 103.67, 90.00 |
Refinement procedure
Resolution | 29.560 - 2.210 |
R-factor | 0.2308 |
Rwork | 0.228 |
R-free | 0.27990 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.522 |
Data reduction software | CrysalisPro (1.171.40.73a) |
Data scaling software | CrysalisPro (1.171.40.73a) |
Phasing software | PHENIX (1.19.1_4122) |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.560 | 2.289 |
High resolution limit [Å] | 2.210 | 2.210 |
Rmerge | 0.117 | 0.346 |
Rmeas | 0.129 | 0.378 |
Rpim | 0.053 | 0.150 |
Number of reflections | 27130 | 2692 |
<I/σ(I)> | 16.83 | 4.56 |
Completeness [%] | 99.8 | 100 |
Redundancy | 5.9 | 6.2 |
CC(1/2) | 0.994 | 0.914 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.6 | 293 | 0.2 M LiSO4, 0.1 M BIS-TRIS, pH 6.6, 17.5% polyethylene glycol 3,350 |