8K4L
Crystal structure of NRF1 homodimer in complex with DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-04-02 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.757, 118.827, 121.821 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.430 - 2.100 |
R-factor | 0.1957 |
Rwork | 0.193 |
R-free | 0.24310 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.061 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.19_4092)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.530 | 2.160 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.072 | 0.568 |
Number of reflections | 32991 | 2615 |
<I/σ(I)> | 18.2 | 4.4 |
Completeness [%] | 100.0 | |
Redundancy | 12.3 | |
CC(1/2) | 0.978 | 0.955 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 2% (v/v) Tacsimate (pH 6.0), 0.1 M Bis-Tris (pH 6.5),20% (w/v) Polyethylene glycol 3350 |