8K0U
Crystal structure of theophylline DNA aptamer bound to hypoxanthine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-25 |
Detector | DECTRIS EIGER2 X 4M |
Wavelength(s) | 0.979183 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 49.102, 49.102, 51.657 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.520 - 1.520 |
R-factor | 0.2237 |
Rwork | 0.222 |
R-free | 0.24700 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.017 |
RMSD bond angle | 1.921 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.660 | 1.560 |
High resolution limit [Å] | 1.520 | 1.520 |
Number of reflections | 11465 | 801 |
<I/σ(I)> | 17.8 | |
Completeness [%] | 100.0 | |
Redundancy | 18.5 | |
CC(1/2) | 1.000 | 0.811 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 291 | 0.2 M Calcium chloride dihydrate 26% v/v Polyethylene glycol 400 |