8JZQ
Crystal structure of Panax quinquefolius Pq3-O-UGT2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-05-25 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97852 |
Spacegroup name | P 1 |
Unit cell lengths | 46.987, 80.886, 126.377 |
Unit cell angles | 93.96, 90.00, 93.75 |
Refinement procedure
Resolution | 37.700 - 2.890 |
R-factor | 0.3086 |
Rwork | 0.307 |
R-free | 0.33290 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.221 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.19_4092: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.950 |
High resolution limit [Å] | 2.890 | 7.860 | 2.900 |
Rmerge | 0.131 | 0.052 | 0.747 |
Rmeas | 0.160 | 0.065 | 0.899 |
Rpim | 0.091 | 0.037 | 0.495 |
Number of reflections | 39238 | 1917 | 2010 |
<I/σ(I)> | 7.5 | ||
Completeness [%] | 95.0 | 93.5 | 95.8 |
Redundancy | 2.8 | 2.8 | 2.9 |
CC(1/2) | 0.992 | 0.991 | 0.543 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 291.15 | 0.25 M ammonium acetate, 0.2 M Sodium citrate tribasic dihydrate, pH 5.0, 25% w/v PEG 4000 |