8JVX
Crystal structure of the dimeric DZBB fold protein mkaL2_v1.2_Z
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-23 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.463, 37.705, 52.239 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.573 - 1.801 |
R-factor | 0.2048 |
Rwork | 0.203 |
R-free | 0.21780 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 |
RMSD bond angle | 1.470 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.910 |
High resolution limit [Å] | 1.800 | 1.800 |
Number of reflections | 12049 | 1919 |
<I/σ(I)> | 10.51 | |
Completeness [%] | 99.1 | |
Redundancy | 3.5 | |
CC(1/2) | 0.991 | 0.984 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 30% 2-propanol, 100mM Tris-HCl pH8.5, 30% PEG 3350 |