8JT1
COLLAGENASE FROM GRIMONTIA (VIBRIO) HOLLISAE 1706B COMPLEXED WITH GLY-PRO-HYP-GLY-PRO-HYP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B1 |
Synchrotron site | SPring-8 |
Beamline | BL26B1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-03 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.0000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 178.017, 74.890, 135.134 |
Unit cell angles | 90.00, 126.02, 90.00 |
Refinement procedure
Resolution | 37.440 - 2.000 |
R-factor | 0.1778 |
Rwork | 0.176 |
R-free | 0.21360 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.786 |
Data reduction software | XDS (Jan 10, 2022) |
Data scaling software | XDS (Jan 10, 2022) |
Phasing software | PHENIX (1.20.1_4487) |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.440 | 2.120 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.080 | 0.662 |
Rmeas | 0.093 | 0.762 |
Number of reflections | 96513 | 15381 |
<I/σ(I)> | 12.5 | 2.24 |
Completeness [%] | 99.3 | 98.7 |
Redundancy | 3.85 | 3.96 |
CC(1/2) | 0.898 | 0.761 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.2M CALCIUM ACETATE, 0.1M MES SODIUM HYDROXIDE PH 6.0, 20% (W/V) POLYETHYLENE GLYCOL 8000 |