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8JR4

Molecular structure of bat MHC II at 2.4 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-03-25
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.987
Spacegroup nameP 42 21 2
Unit cell lengths92.160, 92.160, 107.365
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.430 - 2.300
R-factor0.21457
Rwork0.212
R-free0.26309
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.542
Data reduction softwareHKL-2000 (7.21)
Data scaling softwareHKL-3000 (7.21)
Phasing softwarePHASER (2.7.0)
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.180
High resolution limit [Å]2.1402.140
Rmerge0.1891.073
Number of reflections228212453
<I/σ(I)>15.667
Completeness [%]100.0
Redundancy13.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52910.2 M Calcium acetate hydrate,20% w/v Polyethylene glycol 3,350,pH7.5

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