8JQZ
Crystal Structure of GppNHp-bound mIRGB10
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-11-29 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 62.640, 62.440, 119.230 |
Unit cell angles | 90.00, 99.56, 90.00 |
Refinement procedure
Resolution | 29.430 - 3.050 |
R-factor | 0.2337 |
Rwork | 0.232 |
R-free | 0.26500 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.915 |
Data reduction software | XDS |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.430 | 3.159 |
High resolution limit [Å] | 3.050 | 3.050 |
Number of reflections | 17524 | 1743 |
<I/σ(I)> | 12.86 | |
Completeness [%] | 99.4 | 99.43 |
Redundancy | 6.6 | 6.8 |
CC(1/2) | 0.998 | 0.866 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 20% (w/v) PEG 2,000 monomethyl ether (MME), 0.2 M trimethylamine n-oxide, 0.1 M Tris-HCl (pH 8.5) |