8JQ3
Crystal structure of L-rhamnose isomerase from Lactobacillus rhamnosus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-19 |
Detector | DECTRIS PILATUS3 S 2M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 89.700, 139.940, 147.310 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.510 - 1.900 |
R-factor | 0.16264 |
Rwork | 0.160 |
R-free | 0.21760 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 1.183 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.950 |
High resolution limit [Å] | 1.900 | 8.500 | 1.900 |
Rmerge | 0.086 | 0.028 | 0.689 |
Rmeas | 0.089 | 0.029 | 0.715 |
Number of reflections | 146232 | 1822 | 10740 |
<I/σ(I)> | 22.94 | ||
Completeness [%] | 100.0 | ||
Redundancy | 13.5 | ||
CC(1/2) | 0.999 | 1.000 | 0.892 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | PEG 550MME, MES |