8JLL
Crystal structure of the Green fluorescent protein SEA227D variant at pH 9.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 193 |
Detector technology | CCD |
Collection date | 2022-11-15 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 76.210, 80.964, 179.884 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.190 - 2.690 |
R-factor | 0.2058 |
Rwork | 0.201 |
R-free | 0.28230 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.169 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 6.310 | 2.800 |
High resolution limit [Å] | 2.690 | 5.810 | 2.700 |
Rmerge | 0.200 | 0.131 | 0.450 |
Rmeas | 0.226 | 0.139 | 0.509 |
Rpim | 0.076 | 0.044 | 0.228 |
Number of reflections | 30706 | 3292 | 2835 |
<I/σ(I)> | 2.5 | ||
Completeness [%] | 97.4 | 97.7 | 91.8 |
Redundancy | 7.1 | 8.7 | 3.5 |
CC(1/2) | 0.936 | 0.991 | 0.566 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.1M CHES pH 9.5, 0.2M sodium chloride, 1.26M ammonium sulfate |