8JL6
Crystal structure of the Green fluorescent protein SEA227D variant at pH 5.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 193 |
Detector technology | CCD |
Collection date | 2022-11-15 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 75.808, 80.526, 180.709 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.230 - 2.880 |
R-factor | 0.2001 |
Rwork | 0.194 |
R-free | 0.27520 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.161 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 6.740 | 3.000 |
High resolution limit [Å] | 2.880 | 6.240 | 2.900 |
Rmerge | 0.195 | 0.139 | 0.321 |
Rmeas | 0.215 | 0.149 | 0.384 |
Rpim | 0.086 | 0.052 | 0.205 |
Number of reflections | 24658 | 2704 | 2234 |
<I/σ(I)> | 3.9 | ||
Completeness [%] | 95.1 | 97.4 | 87.5 |
Redundancy | 5 | 7.5 | 2.8 |
CC(1/2) | 0.934 | 0.991 | 0.618 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.1M Citric acid pH 5.5-6.0, 20% (w/v) PEG 6000 |