8JKC
Crystal structure of the Green fluorescent protein SE_A277 variant at pH 4.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 193 |
Detector technology | CCD |
Collection date | 2022-06-14 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 75.787, 80.632, 179.331 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.020 - 1.950 |
R-factor | 0.2022 |
Rwork | 0.201 |
R-free | 0.24640 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.121 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.020 |
High resolution limit [Å] | 1.950 | 4.200 | 1.950 |
Rmerge | 0.126 | 0.084 | 0.415 |
Rmeas | 0.133 | 0.088 | 0.464 |
Rpim | 0.041 | 0.024 | 0.202 |
Total number of observations | 664241 | ||
Number of reflections | 80378 | 8486 | 7689 |
<I/σ(I)> | 5.2 | ||
Completeness [%] | 99.2 | 99.6 | 96.3 |
Redundancy | 8.3 | 12.2 | 4.5 |
CC(1/2) | 0.980 | 0.990 | 0.280 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 298 | 0.1M sodium acetate pH 4.5, 2.2M Sodium Chloride |