8JI5
Crystal structure of AetD in complex with 5-bromo-L-tryptophan and two Fe2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-04-16 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 0.9998 |
Spacegroup name | P 41 |
Unit cell lengths | 65.633, 65.633, 117.313 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 22.770 - 2.010 |
R-factor | 0.20909 |
Rwork | 0.206 |
R-free | 0.27333 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.515 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.000 | 25.000 | 2.080 |
High resolution limit [Å] | 2.010 | 4.320 | 2.010 |
Rmerge | 0.028 | 0.018 | 0.488 |
Rmeas | 0.032 | 0.020 | 0.574 |
Rpim | 0.016 | 0.009 | 0.298 |
Total number of observations | 124247 | ||
Number of reflections | 32155 | 3318 | 3018 |
<I/σ(I)> | 23.1 | ||
Completeness [%] | 97.6 | 99.3 | 92.5 |
Redundancy | 3.9 | 4.4 | 3.3 |
CC(1/2) | 0.998 | 0.999 | 0.822 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.01 M nickel chloride, 20% PEG 2000 MME, 0.1 M Tris, pH 8.5 |