8JG4
Crystal Structure of YAF9A YEATS bound to H3K27cr peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 110 |
Detector technology | PIXEL |
Collection date | 2020-07-13 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 66.331, 117.700, 59.053 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.110 - 2.300 |
R-factor | 0.1747 |
Rwork | 0.172 |
R-free | 0.21180 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.910 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.17.1_3660: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 6.240 | 2.300 |
Rmerge | 0.132 | 0.052 | 0.897 |
Rmeas | 0.139 | 0.055 | 0.953 |
Rpim | 0.043 | 0.017 | 0.314 |
Total number of observations | 216550 | ||
Number of reflections | 21078 | 1192 | 1038 |
<I/σ(I)> | 5 | ||
Completeness [%] | 99.0 | 99.8 | 98.6 |
Redundancy | 10.3 | 9.4 | 8.8 |
CC(1/2) | 0.992 | 0.998 | 0.770 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1 M Tris pH 8.5, 0.2 M Li2SO4, 25% PEG 3350 |