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8JA8

Crystal structure of Mycobacterium tuberculosis LpqY with trehalose bound in a closed liganded form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]100
Detector technologyPIXEL
Collection date2018-12-17
DetectorCS-PAD XPP
Wavelength(s)1.000
Spacegroup nameP 21 21 21
Unit cell lengths57.961, 62.962, 144.402
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.200 - 1.600
Rwork0.168
R-free0.19800
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.016
RMSD bond angle1.381
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549: ???)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.540
High resolution limit [Å]1.5001.500
Rmerge0.070
Number of reflections705086972
<I/σ(I)>12.13
Completeness [%]99.8
Redundancy6.9
CC(1/2)0.9990.835
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729350 mM Magnesium sulfate hydrate, 50 mM HEPES sodium pH 7.0 and 1.6 M Lithium sulfate monohydrate

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PDB entries from 2024-05-15

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