8J65
the structure of L,D-transpeptidase LdtMt2 complex with citrate
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-11-13 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.97853 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 51.184, 75.885, 67.068 |
| Unit cell angles | 90.00, 111.92, 90.00 |
Refinement procedure
| Resolution | 48.115 - 1.800 |
| R-factor | 0.2134 |
| Rwork | 0.212 |
| R-free | 0.23580 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3vyp |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.670 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.120 | 1.840 |
| High resolution limit [Å] | 1.800 | 1.800 |
| Rmerge | 0.068 | 0.784 |
| Rmeas | 0.073 | 0.846 |
| Rpim | 0.038 | 0.314 |
| Number of reflections | 42144 | 2497 |
| <I/σ(I)> | 18.6 | |
| Completeness [%] | 95.6 | 95.8 |
| Redundancy | 7 | |
| CC(1/2) | 0.999 | 0.827 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 25% PEG3350, 10 mM citrate |






