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8J53

Crystal structure of Bacteroides salyersiae GH31 alpha-galactosidase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]100
Detector technologyPIXEL
Collection date2022-05-15
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)1.000
Spacegroup nameC 1 2 1
Unit cell lengths200.521, 157.535, 131.408
Unit cell angles90.00, 116.82, 90.00
Refinement procedure
Resolution48.635 - 3.500
Rwork0.257
R-free0.31280
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.498
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0405)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.6353.620
High resolution limit [Å]3.5003.500
Rmerge0.1681.050
Rmeas0.1991.238
Rpim0.1060.651
Number of reflections459554479
<I/σ(I)>9.32
Completeness [%]99.9
Redundancy6.8
CC(1/2)0.9960.797
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29316% PEG 3350, 40 mM citric acid, 60 mM bis-tris propane

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