8J0Q
Structure of DNA binding domain of human TFAP2B
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-10 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.97915 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.212, 81.829, 115.628 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.360 - 2.400 |
R-factor | 0.18681 |
Rwork | 0.184 |
R-free | 0.24112 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.605 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0257) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.410 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Number of reflections | 19146 | 2025 |
<I/σ(I)> | 12.9 | |
Completeness [%] | 97.2 | |
Redundancy | 6.5 | |
CC(1/2) | 0.995 | 0.970 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2 M Sodium citrate tribasic dihydrate and 20% PEG 3350 (w/v) |