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8IYI

Spermidine synthase from Kluyveromyces lactis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 5C (4A)
Synchrotron sitePAL/PLS
Beamline5C (4A)
Temperature [K]100
Detector technologyCCD
Collection date2019-07-12
DetectorADSC QUANTUM 315r
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths65.252, 98.180, 102.134
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.980 - 1.900
R-factor0.1692
Rwork0.168
R-free0.19870
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.818
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.970
High resolution limit [Å]1.9001.900
Number of reflections523965161
<I/σ(I)>33
Completeness [%]100.0
Redundancy12.9
CC(1/2)0.9960.965
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2939.2% v/v TacsimateTM pH 5.0, 16.5% w/v PEG 3350

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PDB entries from 2024-07-17

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