8IXT
Rat Transcobalamin in Complex with Glutathionylcobalamin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL26B1 |
| Synchrotron site | SPring-8 |
| Beamline | BL26B1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-10-13 |
| Detector | DECTRIS EIGER X 4M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 51.100, 55.060, 143.670 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 37.450 - 1.200 |
| R-factor | 0.1609 |
| Rwork | 0.161 |
| R-free | 0.17050 |
| Structure solution method | SAD |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.991 |
| Data reduction software | XDS (JAN 10 2022) |
| Data scaling software | XSCALE (JAN 10 2022) |
| Phasing software | HKL2Map (0.4.e-beta) |
| Refinement software | PHENIX (1.20-4459) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 37.500 | 43.700 | 1.230 |
| High resolution limit [Å] | 1.200 | 5.370 | 1.200 |
| Rmerge | 0.090 | 0.042 | 1.770 |
| Rmeas | 0.092 | 0.043 | 1.798 |
| Number of reflections | 127252 | 1604 | 9213 |
| <I/σ(I)> | 22.44 | 84.5 | 2.25 |
| Completeness [%] | 99.9 | ||
| Redundancy | 43.7 | ||
| CC(1/2) | 1.000 | 1.000 | 0.785 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 20 % PEG 3000 0.1M Sodium citrate pH 5.5 |






