8IX6
Crystal structure of Pyruvic Oxime Dioxygenase (POD) from Bradyrhizobium sp. WSM3983
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE BL-1A |
| Synchrotron site | Photon Factory |
| Beamline | BL-1A |
| Temperature [K] | 95 |
| Detector technology | PIXEL |
| Collection date | 2017-12-15 |
| Detector | DECTRIS EIGER X 4M |
| Wavelength(s) | 2.7 |
| Spacegroup name | I 4 3 2 |
| Unit cell lengths | 153.896, 153.896, 153.896 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 76.950 - 2.470 |
| R-factor | 0.2314 |
| Rwork | 0.230 |
| R-free | 0.25770 |
| Structure solution method | SAD |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.514 |
| Data scaling software | XDS |
| Phasing software | CRANK2 |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 76.950 | 2.510 |
| High resolution limit [Å] | 2.470 | 2.470 |
| Rmerge | 0.087 | 1.766 |
| Number of reflections | 11546 | 569 |
| <I/σ(I)> | 43.9 | |
| Completeness [%] | 100.0 | |
| Redundancy | 38.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 298 | 1.56M ammonium sulfate, 25% (v/v) glycerol |






