8IW5
Crystal structure of liprin-beta H2H3 dimer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-01 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 29.793, 50.637, 30.780 |
Unit cell angles | 90.00, 113.44, 90.00 |
Refinement procedure
Resolution | 27.330 - 1.700 |
R-factor | 0.2236 |
Rwork | 0.221 |
R-free | 0.27170 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.774 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.730 |
High resolution limit [Å] | 1.700 | 4.610 | 1.700 |
Rmerge | 0.104 | 0.076 | 0.724 |
Rmeas | 0.116 | 0.087 | 0.832 |
Rpim | 0.051 | 0.041 | 0.396 |
Total number of observations | 49910 | ||
Number of reflections | 8724 | 349 | 431 |
<I/σ(I)> | 8.4 | ||
Completeness [%] | 93.3 | 71.5 | 92.7 |
Redundancy | 5.7 | 4.3 | 4.3 |
CC(1/2) | 0.992 | 0.990 | 0.704 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.05 M Calcium acetate, 0.1 M Sodium cacodylate pH 6.0 and 25% v/v MPD |