8IQB
Crystal structure of AsfvPrimPol N-terminal Prim/Pol domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-20 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 43.829, 73.610, 78.927 |
Unit cell angles | 90.00, 95.39, 90.00 |
Refinement procedure
Resolution | 20.710 - 2.580 |
R-factor | 0.2205 |
Rwork | 0.217 |
R-free | 0.26430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold |
RMSD bond length | 0.003 |
RMSD bond angle | 0.647 |
Data reduction software | XDS |
Data scaling software | Aimless |
Refinement software | PHENIX ((1.19.1_4122: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.720 | 2.720 |
High resolution limit [Å] | 2.580 | 2.580 |
Rmerge | 0.129 | 0.602 |
Rmeas | 0.158 | 0.741 |
Rpim | 0.089 | 0.427 |
Total number of observations | 6753 | |
Number of reflections | 28321 | 2295 |
<I/σ(I)> | 5.2 | 2.4 |
Completeness [%] | 98.5 | |
Redundancy | 3 | 2.9 |
CC(1/2) | 0.981 | 0.560 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1 M Bis-Tris propane pH 8.5, 20% PEG 3350 and 0.2 M Sodium iodide |