Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8IOM

Crystal structure of the carboxy-terminal channel-forming domain of Colicin Ib

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE BL15A1
Synchrotron siteNSRRC
BeamlineBL15A1
Temperature [K]80
Detector technologyCCD
Collection date2021-10-28
DetectorRAYONIX MX300-HS
Wavelength(s)1
Spacegroup nameI 41
Unit cell lengths91.994, 91.994, 113.896
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.080 - 3.000
R-factor0.1985
Rwork0.196
R-free0.21890
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.544
Data scaling softwareHKL-2000
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0003.060
High resolution limit [Å]2.9402.940
Rmerge0.0900.556
Rmeas0.1010.627
Rpim0.0470.289
Number of reflections110401107
<I/σ(I)>9
Completeness [%]99.9100
Redundancy4.64.7
CC(1/2)0.925
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5293.5Precipitant: 0.1M sodium chloride, 0.1M sodium HEPES pH7.5, 12% w/v PEG 4000, 0.5 microliter 8mg/ml colicin Ib C domain mix with the same volume precipitant in the drop colicin Ib C domain buffer:20mM sodium, citrate pH5.2, 200mM NaCl

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon