8INT
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) K90R Mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-04 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.953740 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 97.118, 81.021, 51.486 |
Unit cell angles | 90.00, 114.92, 90.00 |
Refinement procedure
Resolution | 29.410 - 1.660 |
R-factor | 0.2015 |
Rwork | 0.200 |
R-free | 0.22420 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.893 |
Data reduction software | autoPROC |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (V1.20) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.410 | 29.410 | 1.770 |
High resolution limit [Å] | 1.660 | 4.930 | 1.660 |
Rmerge | 0.044 | 0.025 | 0.808 |
Rmeas | 0.048 | 0.027 | 0.873 |
Number of reflections | 42299 | 1672 | 6755 |
<I/σ(I)> | 18.77 | ||
Completeness [%] | 99.6 | ||
Redundancy | 6.9 | ||
CC(1/2) | 1.000 | 1.000 | 0.859 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 293 | 0.6%(1% w/v Ampicillin sodium salt, 1% w/v Apramycin sulfate salt, 1% w/v Bacitracin, 1% w/v Dihydrostreptomycin sesquisulfate, 1% w/v Gentamicin sulfate, 1% w/v Spectinomycin dihydrochloride pentahydrate), 0.1M(Tris (base); BICINE)PH8,5, 30%(40% v/v PEG 500* MME; 20 % w/v PEG 20000) |